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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
total RNA-seq
21
ChIP-seq
14
ATAC-seq
Assay category
52
Transcription
21
DNA binding
14
DNA accessibility
Target of assay
21
histone
21
histone modification
11
narrow histone mark
10
broad histone mark
Date released
61
September, 2018
35
October, 2019
33
April, 2018
33
July, 2018
29
August, 2017
26
February, 2021
26
May, 2021
20
June, 2019
19
December, 2017
16
November, 2019
15
February, 2023
13
July, 2019
6
August, 2021
6
December, 2019
6
March, 2020
6
November, 2017
5
May, 2019
5
September, 2017
3
August, 2018
2
October, 2018
1
June, 2018
Available data
87
bam
87
bigWig
61
fastq
52
tsv
35
bed narrowPeak
14
bigBed narrowPeak
Organism
87
Homo sapiens
Biosample type
61
primary cell
26
cell line
Organ
455
connective tissue
386
adipose tissue
150
bone element
98
pancreas
87
epithelium
66
artery
66
blood vessel
66
heart
66
vasculature
8
kidney
8
skeleton
6
limb
3
liver
Project
87
AMP
Genome assembly (visualization)
87
GRCh38
87
hg19
Lab
87
AMP-T2D consortium
6
Klaus Kaestner, Upenn
Audit category:
26
inconsistent ontology term
Audit category:
21
missing controlled_by
BIOSAMPLE
ASSAY
87 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
primary cell
pancreatic ductal cell
4
13
4
pancreatic beta cell
10
4
pancreatic acinar cell
2
8
3
pancreatic alpha cell
10
3
cell line
EndoC_BH1
26
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