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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
ATAC-seq
8
total RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
single cell RNA-seq
Assay category
44
DNA accessibility
9
Transcription
Date released
318
November, 2017
269
May, 2020
187
June, 2019
166
July, 2018
157
August, 2017
157
May, 2021
149
February, 2021
131
August, 2021
107
October, 2019
87
July, 2019
87
November, 2018
63
December, 2017
59
March, 2020
54
February, 2023
50
November, 2019
47
April, 2018
41
September, 2018
35
December, 2018
25
May, 2019
23
February, 2018
23
January, 2019
23
October, 2018
21
February, 2020
20
April, 2019
11
September, 2017
10
December, 2019
9
October, 2017
7
January, 2018
3
August, 2018
3
June, 2018
2
May, 2022
1
August, 2022
1
October, 2022
Available data
27
bed narrowPeak
16
tsv
5
bed bed3
4
txt
Organism
53
Homo sapiens
Biosample type
41
tissue
12
primary cell
1
cell line
Organ
36
heart
artery
35
blood vessel
35
vasculature
31
eye
15
epithelium
connective tissue
8
bone element
8
skeleton
1
adipose tissue
1
brain
1
pancreas
Project
54
AMP
Genome assembly (visualization)
32
hg19
Lab
76
Klaus Kaestner, Upenn
54
AMP-T2D consortium
23
Kyle Gaulton, UCSD
3
Struan F.A. Grant, CHOP
Audit category:
6
inconsistent ontology term
organ_slims!
artery
connective tissue
target.investigated_as!
histone
BIOSAMPLE
ASSAY
54 results
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Clear Filters
ATAC-seq
total RNA-seq
CRISPR genome editing followed by sgRNA sequencing
single cell RNA-seq
tissue
retina
15
2
pigmented layer of retina
12
2
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
+ See 3 more…
primary cell
gabaergic neuron
3
glutamatergic neuron
3
microglial cell/astrocyte
3
oligodendrocyte
3
cell line
EndoC_BH1
1
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