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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
20
DNA binding
4
Transcription
Target of assay
35
histone
35
histone modification
broad histone mark
15
narrow histone mark
5
RNA binding protein
5
transcription factor
Date released
20
May, 2024
4
March, 2023
Available data
20
bed narrowPeak
20
bigWig
Organism
20
Homo sapiens
Biosample type
20
tissue
2
cell line
2
stem cell
Organ
20
heart
Project
20
AMP
4
community
Genome assembly (visualization)
20
GRCh38
Lab
3184
AMP-T2D consortium
269
Kyle Gaulton, UCSD
172
Klaus Kaestner, Upenn
142
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
37
Bing Ren, UCSD
20
Patrick T. Ellinor, Broad
19
Xin Sun, UCSD
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
4
Rohit N. Kulkarni, M.D., Ph.D.
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
organ_slims!
epithelium
organ_slims!!
epithelium
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
24 results
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ChIP-seq
CRISPR RNA-seq
CRISPRi RNA-seq
shRNA RNA-seq
siRNA RNA-seq
tissue
left cardiac atrium
20
cell line
EndoC-BH1
1
1
stem cell
SB Ad3.1
1
1
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