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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
MeRIP-seq
2
Hi-C
1
ATAC-seq
1
total RNA-seq
Assay category
2
3D chromatin structure
1
DNA accessibility
1
Transcription
Target of assay
5
control
5
nucleotide modification
Date released
10
November, 2020
2
August, 2021
2
March, 2019
Available data
1
bedpe
1
bedpe bed3+
1
hic
1
tsv
Organism
14
Homo sapiens
Biosample type
8
tissue
6
cell line
Organ
31
liver
19
lung
14
pancreas
6
epithelium
2
kidney
Project
14
AMP
Genome assembly (visualization)
2
hg19
1
GRCh38
Lab
AMP-T2D consortium
152
Klaus Kaestner, Upenn
51
Kyle Gaulton, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
4
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
1
Stephen Parker, UMich
0
Xin Sun, UCSD
Audit category:
6
inconsistent ontology term
lab.title!
AMP-T2D consortium
Katalin Susztak, Upenn
BIOSAMPLE
ASSAY
14 results
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MeRIP-seq
Hi-C
ATAC-seq
total RNA-seq
tissue
islet of Langerhans
4
2
1
1
cell line
EndoC_BH1
6
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