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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 18ChIP-seq
  • 3Hi-C
  • 1ATAC-seq
  • 1whole genome sequencing assay
Assay category
  • 18DNA binding
  • 33D chromatin structure
  • 1DNA accessibility
  • 1DNA sequencing
Target of assay
  • 11transcription factor
  • 4control
  • 3histone
  • 3histone modification
  • 2narrow histone mark
  • 1RNA binding protein
  • 1broad histone mark
Date released
  • 21August, 2021
  • 2March, 2019
Available data
  • 14bed narrowPeak
  • 14bigWig
  • 2bedpe bed3+
  • 2hic
  • 1bedpe
  • 1vcf
Organism
  • 23Homo sapiens
Biosample type
  • 20cell line
  • 3tissue
Organ
  • 20liver
  • 3pancreas
Project
  • 23AMP
Genome assembly (visualization)
  • 17hg19
  • 1GRCh38
Lab
  • 2373AMP-T2D consortium
  • 273Kyle Gaulton, UCSD
  • 147Klaus Kaestner, Upenn
  • 82Katalin Susztak, Upenn
  • 40Patrick T. Ellinor, Broad
  • 23Bing Ren, UCSD
  • 20Karen Mohlke, UNC
  • 10Xin Sun, UCSD
  • 7Struan F.A. Grant, CHOP
  • 4Anna Gloyn, Oxford
  • 2Mark McCarthy, Oxford
  • 1ITG
  • 1Maike Sander, UCSD
  • 1Stephen Parker, UMich
replicates.library.nucleic_acid_term_name!
  • RNA
BIOSAMPLE
ASSAY

23 results

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ChIP-seq
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ATAC-seq
whole genome sequencing assay
cell line
HepG21811
tissue
islet of Langerhans21
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