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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 4STARR-seq
  • 2ChIP-seq
  • 2Hi-C
  • 1ATAC-seq
  • 1total RNA-seq
Assay category
  • 23D chromatin structure
  • 2DNA binding
  • 1DNA accessibility
  • 1Transcription
Target of assay
  • 2transcription factor
Date released
  • 8August, 2021
  • 2March, 2019
Available data
  • 2bed narrowPeak
  • 2bigWig
  • 1bedpe
  • 1bedpe bed3+
  • 1hic
  • 1tsv
Organism
  • 10Homo sapiens
Biosample type
  • 6cell line
  • 4tissue
Organ
  • 4liver
  • 4pancreas
  • 2kidney
Project
  • 10AMP
Genome assembly (visualization)
  • 4hg19
  • 1GRCh38
Lab
  • 1261AMP-T2D consortium
  • 173Kyle Gaulton, UCSD
  • 10Bing Ren, UCSD
  • 10Rohit N. Kulkarni, M.D., Ph.D.
  • 9Klaus Kaestner, Upenn
  • 7Struan F.A. Grant, CHOP
  • 4Katalin Susztak, Upenn
  • 2Mark McCarthy, Oxford
  • 1ITG
  • 1Maike Sander, UCSD
  • 1Stephen Parker, UMich
replication_type!
  • unreplicated
BIOSAMPLE
ASSAY

10 results

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STARR-seq
ChIP-seq
Hi-C
ATAC-seq
total RNA-seq
cell line
HepG222
HEK293T2
tissue
islet of Langerhans211
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