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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
97
ChIP-seq
41
total RNA-seq
19
ATAC-seq
11
snATAC-seq
2
HiChIP
Assay category
97
DNA binding
41
Transcription
30
DNA accessibility
Target of assay
88
histone
88
histone modification
55
broad histone mark
33
narrow histone mark
8
control
1
transcription factor
Date released
129
May, 2021
24
May, 2022
11
January, 2021
4
May, 2020
2
February, 2023
Available data
106
bigWig
94
bam
86
bed narrowPeak
38
tagAlign
32
tsv
24
fastq
6
txt
2
bed bed3+
Organism
170
Homo sapiens
Biosample type
111
primary cell
30
tissue
27
in vitro differentiated cells
2
cell line
Organ
30
pancreas
6
blood
6
bodily fluid
Project
87
AMP
83
T1D
Genome assembly (visualization)
124
hg19
70
GRCh38
Lab
2651
AMP-T2D consortium
315
Klaus Kaestner, Upenn
170
Kyle Gaulton, UCSD
138
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
40
Patrick T. Ellinor, Broad
28
Bing Ren, UCSD
19
Xin Sun, UCSD
4
Anna Gloyn, Oxford
BIOSAMPLE
ASSAY
170 results
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ChIP-seq
total RNA-seq
ATAC-seq
snATAC-seq
HiChIP
primary cell
monocyte
38
28
CD8-positive, alpha-beta T cell
33
2
peripheral blood mononuclear cell
6
immature natural killer cell
1
natural killer cell
1
+ See 2 more…
tissue
islet of Langerhans
6
18
3
pancreas
1
2
in vitro differentiated cells
embryonic stem cell
26
1
cell line
EndoC_BH1
2
See all biosamples
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