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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
23
accessible chromatin
21
target gene predictions
20
gene expression
17
chromatin state
14
candidate regulatory elements
8
binding sites
8
eQTL
7
histone modifications
4
differential activity
3
Fine-mapped variants
1
caQTL
1
variant allelic effects
Date released
46
September, 2022
29
February, 2024
February, 2021
10
August, 2021
10
March, 2020
5
June, 2020
5
November, 2021
4
March, 2023
3
August, 2017
3
January, 2020
May, 2020
3
May, 2021
2
February, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
77
bed bed3+
24
tsv
22
bigWig
14
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
127
Homo sapiens
Biosample type
53
primary cell
48
tissue
20
cell line
6
in vitro differentiated cells
Organ
736
epithelium
442
kidney
341
connective tissue
336
brain
276
musculature of body
240
lung
239
pancreas
215
intestine
201
vasculature
190
heart
175
limb
162
embryo
156
blood vessel
143
bodily fluid
136
blood
134
skin of body
127
liver
126
large intestine
113
extraembryonic component
90
eye
88
stomach
71
uterus
66
small intestine
63
adipose tissue
59
mammary gland
58
adrenal gland
55
artery
55
placenta
52
bone element
48
prostate gland
43
ureter
37
thymus
36
gonad
36
penis
35
lymph node
34
spinal cord
33
esophagus
23
spleen
19
nerve
18
lymphoid tissue
18
ovary
18
thyroid gland
17
testis
16
lymphatic vessel
14
mouth
13
vein
11
bronchus
11
pituitary gland
9
breast
9
skeleton
8
urinary bladder
7
bone marrow
7
tongue
7
vagina
4
nose
1
pericardium
1
trachea
Project
122
AMP
5
ENCODE
Genome assembly (visualization)
100
hg19
59
GRCh38
2
hg18
month_released!
April, 2019
February, 2021
March, 2024
May, 2020
BIOSAMPLE
TYPE
127 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
chromatin state
candidate regulatory elements
binding sites
eQTL
histone modifications
differential activity
Fine-mapped variants
caQTL
variant allelic effects
primary cell
hepatocyte
8
3
10
1
1
3
1
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
3
1
1
1
pancreatic endothelial cell
1
3
tissue
liver
4
10
1
9
7
7
1
1
right lobe of liver
1
1
1
1
1
3
cell line
HepG2
1
3
2
1
2
4
HuH-7
1
1
1
1
HuH-7.5
1
1
1
in vitro differentiated cells
hepatocyte
1
1
1
hepatocyte(AFP)
3
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