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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
71
ChIP-seq
Assay category
71
DNA binding
Target of assay
149
histone
149
histone modification
broad histone mark
71
narrow histone mark
52
control
18
transcription factor
9
RNA binding protein
5
nucleotide modification
Date released
34
August, 2017
15
September, 2018
11
October, 2018
4
November, 2019
3
March, 2020
3
October, 2019
May, 2021
1
May, 2019
Available data
67
bigWig
65
bam
57
bed narrowPeak
48
fastq
19
bigBed narrowPeak
6
bed bed3+
6
tagAlign
4
bed broadPeak
Organism
69
Homo sapiens
Biosample type
32
tissue
31
primary cell
8
cell line
Organ
117
brain
71
pancreas
60
liver
47
epithelium
33
connective tissue
26
vasculature
25
blood vessel
25
heart
15
limb
13
musculature of body
12
adipose tissue
8
embryo
8
nerve
7
kidney
6
artery
6
vein
4
gonad
4
ovary
3
eye
2
spleen
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
68
AMP
3
T1D
Genome assembly (visualization)
67
hg19
65
GRCh38
Lab
71
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
Audit category:
26
missing controlled_by
Audit category:
6
inconsistent control read length
month_released!
April, 2019
May, 2021
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
71 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
16
body of pancreas
6
endocrine pancreas
6
pancreas
4
primary cell
pancreatic endocrine cell
12
pancreatic ductal cell
7
pancreatic acinar cell
4
pancreatic alpha cell
4
pancreatic beta cell
4
cell line
EndoC_BH1
5
Panc1
3
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