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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
241
gene expression
185
accessible chromatin
122
target gene predictions
110
candidate regulatory elements
92
differential activity
51
chromatin state
43
binding sites
41
variant allelic effects
25
histone modifications
3
eQTL
2
caQTL
Date released
196
February, 2021
155
September, 2023
151
September, 2022
127
November, 2021
76
February, 2024
38
March, 2023
34
May, 2021
25
June, 2020
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
January, 2020
12
February, 2023
10
May, 2024
9
February, 2020
April, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
527
bed bed3+
312
tsv
149
bigWig
66
txt
48
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
915
Homo sapiens
Biosample type
786
primary cell
61
tissue
42
cell line
26
in vitro differentiated cells
Organ
915
epithelium
610
kidney
444
connective tissue
437
brain
369
musculature of body
308
lung
289
intestine
265
pancreas
249
vasculature
237
heart
237
limb
215
bodily fluid
207
embryo
205
blood
204
skin of body
190
blood vessel
174
large intestine
146
extraembryonic component
145
liver
119
stomach
107
eye
89
bone element
87
mammary gland
84
small intestine
83
uterus
79
adipose tissue
78
prostate gland
73
adrenal gland
73
placenta
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
26
testis
24
lymphoid tissue
24
nerve
23
lymphatic vessel
23
ovary
23
thyroid gland
21
vein
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
611
AMP
155
KPMP
127
ENCODE
20
T1D
2
community
Genome assembly (visualization)
578
hg19
227
GRCh38
month_released!
April, 2020
August, 2021
January, 2020
BIOSAMPLE
TYPE
915 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
6
14
7
3
2
2
1
1
2
hepatocyte
13
7
3
2
1
1
2
1
epithelial cell of proximal tubule
15
1
2
1
1
1
foreskin keratinocyte
4
11
4
glomerular endothelial cell
13
1
1
2
1
1
+ See 135 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 15 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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