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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
118
candidate regulatory elements
104
target gene predictions
90
accessible chromatin
68
chromatin state
54
gene expression
33
differential activity
19
binding sites
17
eQTL
17
histone modifications
11
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
184
September, 2022
113
February, 2021
47
March, 2023
38
May, 2021
28
February, 2024
25
November, 2021
22
January, 2021
16
June, 2020
10
March, 2020
8
August, 2021
7
August, 2018
7
May, 2020
6
August, 2017
6
January, 2022
6
October, 2019
4
January, 2020
2
February, 2020
2
March, 2024
2
November, 2019
2
October, 2022
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2022
Available data
366
bed bed3+
82
tsv
70
bigWig
60
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
1
bed bed9+
Organism
540
Homo sapiens
Biosample type
270
tissue
146
primary cell
121
cell line
3
in vitro differentiated cells
Organ
952
epithelium
652
kidney
466
brain
465
connective tissue
375
musculature of body
308
lung
289
intestine
277
pancreas
266
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
202
blood vessel
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
lymphatic vessel
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
491
AMP
25
ENCODE
22
T1D
2
community
Genome assembly (visualization)
441
hg19
127
GRCh38
month_released!
April, 2020
BIOSAMPLE
TYPE
540 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
differential activity
binding sites
eQTL
histone modifications
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
tissue
large intestine
27
14
1
13
1
islet of Langerhans
1
6
3
11
2
13
1
1
2
2
2
body of pancreas
8
5
4
2
1
1
3
sigmoid colon
10
7
1
5
pancreas
5
5
5
3
1
1
1
1
+ See 30 more…
primary cell
pancreatic ductal cell
3
6
3
3
1
2
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 19 more…
cell line
EndoC_BH1
1
8
8
3
1
HT-29
2
2
1
1
1
1
MG63
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
+ See 20 more…
in vitro differentiated cells
pancreatic ductal cell
3
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