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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
ChIP-seq
5
MeRIP-seq
Assay category
5
DNA binding
Target of assay
786
histone
786
histone modification
409
narrow histone mark
377
broad histone mark
374
transcription factor
266
control
92
RNA binding protein
89
recombinant protein
20
chromatin remodeller
5
nucleotide modification
5
other context
5
other post-translational modification
Date released
5
November, 2020
3
November, 2018
2
November, 2017
Available data
5
bam
5
bed narrowPeak
5
bigBed narrowPeak
5
bigWig
5
fastq
1
bed broadPeak
1
bigBed broadPeak
Organism
10
Homo sapiens
Biosample type
5
cell line
5
tissue
Organ
5
pancreas
3
epithelium
3
spleen
2
liver
Project
10
AMP
Genome assembly (visualization)
5
GRCh38
5
hg19
Lab
5
AMP-T2D consortium
5
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
3
inconsistent ontology term
month_released!
August, 2017
December, 2017
organ_slims!
bodily fluid
BIOSAMPLE
ASSAY
10 results
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ChIP-seq
MeRIP-seq
cell line
EndoC_BH1
3
HepG2
2
tissue
spleen
3
islet of Langerhans
2
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