Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
ChIP-seq
Assay category
41
DNA binding
Target of assay
729
histone
729
histone modification
387
narrow histone mark
342
broad histone mark
223
transcription factor
222
control
69
RNA binding protein
23
recombinant protein
18
chromatin remodeller
5
nucleotide modification
3
other context
3
other post-translational modification
Date released
November, 2017
23
November, 2018
7
October, 2019
6
January, 2019
August, 2017
3
December, 2017
2
December, 2018
Available data
41
bam
40
bed narrowPeak
40
bigWig
34
fastq
33
bigBed narrowPeak
Organism
41
Homo sapiens
Biosample type
38
cell line
2
tissue
1
in vitro differentiated cells
Organ
24
liver
10
blood
10
bodily fluid
7
kidney
1
epithelium
Project
41
AMP
Genome assembly (visualization)
40
GRCh38
38
hg19
Lab
41
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
3
inconsistent control
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
month_released!
August, 2017
November, 2017
organ_slims!
lymph node
BIOSAMPLE
ASSAY
41 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
21
GM12878
10
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
RCC 7860 vector
2
tissue
liver
2
in vitro differentiated cells
hepatocyte
1
Download