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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 398total RNA-seq
  • 23ChIP-seq
  • 5ATAC-seq
  • 3small RNA-seq
  • 2DNase-seq
  • 2pCHi-C
  • 1RNA microarray
Assay category
  • 401Transcription
  • 23DNA binding
  • 7DNA accessibility
Target of assay
  • 18control
  • 5RNA binding protein
  • 5transcription factor
Date released
  • 386February, 2021
  • August, 2017
  • 23October, 2018
  • 12July, 2019
  • 2February, 2020
  • 1August, 2018
  • 1August, 2021
  • 1February, 2023
  • 1January, 2018
  • 1June, 2019
  • 1March, 2020
  • 1May, 2023
  • 1November, 2018
  • 1November, 2019
  • 1October, 2017
  • 1October, 2019
Available data
  • 425bam
  • 408bigWig
  • 401tsv
  • 26fastq
  • 10bed narrowPeak
  • 8bigBed narrowPeak
  • 2bed bed3+
  • 2bed broadPeak
  • 2bigBed broadPeak
  • 1bedpe bed3+
Organism
  • 433Homo sapiens
Biosample type
  • 431tissue
  • 2primary cell
  • 1in vitro differentiated cells
Organ
  • 758pancreas
  • 737liver
  • 559connective tissue
  • 495epithelium
  • 434adipose tissue
  • 393heart
  • 354kidney
  • 286brain
  • 236vasculature
  • 230blood vessel
  • 159bone element
  • 141artery
  • 122limb
  • 70musculature of body
  • 69blood
  • 69bodily fluid
  • 61eye
  • 43nerve
  • 37embryo
  • 25spleen
  • 22vein
  • 20lung
  • 18ureter
  • 16skeleton
  • 5gonad
  • 5ovary
  • 2intestine
  • 2pericardium
  • 2pituitary gland
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 434AMP
Genome assembly (visualization)
  • 411hg19
  • 408GRCh38
Lab
  • 434AMP-T2D consortium
Audit category:
  • 1inconsistent ontology term
month_released!
  • August, 2017
BIOSAMPLE
ASSAY

434 results

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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
small RNA-seq
DNase-seq
pCHi-C
RNA microarray
tissue
adipose tissue38231
subcutaneous adipose tissue71211
omental fat pad511112
visceral abdominal adipose tissue3
adipose tissue(adipose white tissue)1
primary cell
mesenchymal stem cell of adipose11
in vitro differentiated cells
white fat cell1
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