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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
50
ChIP-seq
Assay category
50
DNA binding
Target of assay
95
histone
95
histone modification
69
transcription factor
59
control
50
broad histone mark
45
narrow histone mark
23
RNA binding protein
10
chromatin remodeller
5
nucleotide modification
Date released
August, 2017
19
October, 2018
17
September, 2018
6
November, 2019
4
June, 2019
4
October, 2019
Available data
50
bam
49
bed narrowPeak
49
bigWig
28
fastq
26
bigBed narrowPeak
Organism
50
Homo sapiens
Biosample type
21
primary cell
19
tissue
10
cell line
Organ
70
brain
57
heart
46
pancreas
45
blood vessel
45
vasculature
38
epithelium
34
limb
23
liver
16
nerve
15
kidney
14
artery
9
vein
8
musculature of body
4
connective tissue
4
embryo
4
spleen
0
bodily fluid
Project
50
AMP
Genome assembly (visualization)
49
GRCh38
49
hg19
Lab
50
AMP-T2D consortium
Audit category:
10
inconsistent ontology term
Audit category:
17
missing controlled_by
month_released!
August, 2017
BIOSAMPLE
ASSAY
50 results
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ChIP-seq
primary cell
pancreatic endocrine cell
7
pancreatic ductal cell
6
mesenchymal stem cell
4
pancreatic acinar cell
4
tissue
body of pancreas
11
endocrine pancreas
8
cell line
EndoC_BH1
6
Panc1
4
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