Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
87
accessible chromatin
84
candidate regulatory elements
81
target gene predictions
48
gene expression
44
chromatin state
29
binding sites
24
eQTL
22
histone modifications
16
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
129
September, 2022
106
February, 2021
47
November, 2021
21
June, 2020
18
February, 2024
17
September, 2023
15
May, 2021
11
August, 2021
11
October, 2022
10
January, 2020
10
March, 2020
10
May, 2020
9
January, 2022
August, 2017
7
February, 2020
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
March, 2024
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
324
bed bed3+
66
tsv
53
bigWig
44
bed bed9
7
txt
1
bigBed bed9
1
bigBed narrowPeak
Organism
459
Homo sapiens
Biosample type
251
primary cell
132
tissue
45
in vitro differentiated cells
30
cell line
1
stem cell
Organ
946
epithelium
652
kidney
460
brain
453
connective tissue
372
musculature of body
310
lung
285
intestine
274
pancreas
265
vasculature
heart
244
limb
216
bodily fluid
214
embryo
205
blood
203
blood vessel
203
skin of body
171
large intestine
153
liver
146
extraembryonic component
118
stomach
109
eye
89
bone element
87
adipose tissue
86
mammary gland
83
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
386
AMP
47
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
384
hg19
125
GRCh38
2
hg18
month_released!
August, 2017
organ_slims!
heart
penis
BIOSAMPLE
TYPE
459 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
gene expression
chromatin state
binding sites
eQTL
histone modifications
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
1
10
1
osteoblast
5
2
2
2
1
3
2
fibroblast of lung
6
4
3
2
fibroblast of dermis
4
4
3
1
+ See 42 more…
tissue
adipose tissue
2
7
8
3
6
1
4
1
ovary
1
8
6
1
4
1
subcutaneous adipose tissue
2
2
5
6
1
1
3
omental fat pad
2
5
2
2
2
2
3
testis
1
7
3
1
3
1
1
1
+ See 8 more…
in vitro differentiated cells
adipocyte
4
4
6
1
2
1
1
mesenchymal stem cell
1
3
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
cell line
GM23248
1
2
1
1
1
1
NT2-D1 cell
1
1
1
1
2
HT1080
2
1
1
adipose tissue derived mesenchymal stem cell
1
1
chondrocyte
1
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download