Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 96target gene predictions
  • 69candidate regulatory elements
  • 33chromatin state
  • 10accessible chromatin
  • 6binding sites
  • 5histone modifications
  • 2eQTL
  • 2gene expression
Date released
  • 98September, 2022
  • 52July, 2026
  • 46February, 2021
  • 7June, 2020
  • 6November, 2021
  • 5May, 2021
  • August, 2017
  • 3February, 2024
  • 2January, 2022
  • 2March, 2024
  • 1March, 2020
  • 1October, 2022
Available data
  • 188bed bed3+
  • 33bed bed9
  • 3bigWig
  • 2tsv
Organism
  • 223Homo sapiens
Collection Tags
  • 99EpiMap
  • 52ENCODE-rE2G
  • 37ENCODE
  • 17ChIP-Atlas
  • 6AMP
  • 6DGA
  • 6T2DKP
  • 24DN
  • 2GTEx
  • 2T1D
  • 2T2D
  • 2eQTLCatalogue
Biosample type
  • 159tissue
  • 58cell line
  • 6primary cell
Organ
  • 3363blood
  • 2901vasculature
  • 2860blood vessel
  • 2851bodily fluid
  • 2658vein
  • 949epithelium
  • 897brain
  • 756kidney
  • 511connective tissue
  • 488heart
  • 439lung
  • 383musculature of body
  • 354intestine
  • 316pancreas
  • 295skin of body
  • 244limb
  • 237liver
  • 223large intestine
  • 214embryo
  • 174extraembryonic component
  • 161eye
  • 140adipose tissue
  • 139stomach
  • 111muscle organ
  • 106bone element
  • 103mammary gland
  • 102adrenal gland
  • 97placenta
  • 96small intestine
  • 93thymus
  • 93uterus
  • 88artery
  • 87prostate gland
  • 73ureter
  • 64gonad
  • 64penis
  • 63spleen
  • 62lymph node
  • 60__MARKER__
  • 49spinal cord
  • 48esophagus
  • 47thyroid gland
  • 32ovary
  • 31testis
  • 25nerve
  • 24lymphoid tissue
  • 24skeleton
  • 21lymphatic vessel
  • 21mouth
  • 16bronchus
  • 15breast
  • 13bone marrow
  • 13pituitary gland
  • 13urinary bladder
  • 12tongue
  • 12vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 217AMP
  • 6ENCODE
Genome assembly (visualization)
  • 167hg19
  • 95GRCh38
month_released!
  • August, 2017
BIOSAMPLE
TYPE

223 results

search-icontable-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine28271311
sigmoid colon101051
transverse colon98411
colonic mucosa4421
mucosa of rectum242
cell line
HCT1161921
HT-29321111
SW480221111
RKO11111
Caco-231
primary cell
colon epithelial cell33
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego