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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
33
candidate regulatory elements
19
target gene predictions
17
chromatin state
11
binding sites
8
histone modifications
7
accessible chromatin
2
gene expression
2
variant allelic effects
1
eQTL
Date released
45
September, 2022
36
February, 2021
6
June, 2020
3
May, 2021
2
January, 2020
2
March, 2024
2
May, 2020
August, 2017
1
February, 2024
1
January, 2022
1
March, 2020
1
October, 2022
Available data
79
bed bed3+
17
bed bed9
2
bigBed bed9
2
tsv
1
bigWig
Organism
100
Homo sapiens
Biosample type
55
cell line
29
primary cell
16
tissue
Organ
946
epithelium
652
kidney
brain
453
connective tissue
372
musculature of body
310
lung
285
intestine
274
pancreas
265
vasculature
255
heart
244
limb
216
bodily fluid
214
embryo
205
blood
203
blood vessel
203
skin of body
171
large intestine
153
liver
146
extraembryonic component
118
stomach
109
eye
89
bone element
adipose tissue
86
mammary gland
83
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
100
AMP
Genome assembly (visualization)
96
hg19
19
GRCh38
month_released!
August, 2017
organ_slims!
adipose tissue
brain
BIOSAMPLE
TYPE
100 results
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candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
gene expression
variant allelic effects
eQTL
cell line
22Rv1
4
2
2
1
1
LNCaP clone FGC
3
2
2
PC-3
2
1
1
1
1
1
RWPE1
2
1
1
1
1
1
LNCAP
2
1
1
1
1
+ See 6 more…
primary cell
endothelial cell of umbilical vein
6
4
4
2
2
1
epithelial cell of prostate
4
3
2
luminal epithelial cell of prostatic duct
1
tissue
prostate gland
4
2
2
2
2
1
1
prostate
1
whole blood
1
See all biosamples
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