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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 106ChIP-seq
Assay category
  • 106DNA binding
Target of assay
  • 818histone
  • 818histone modification
  • 467transcription factor
  • 426narrow histone mark
  • 392broad histone mark
  • 293control
  • 106RNA binding protein
  • 89recombinant protein
  • 33chromatin remodeller
  • 5nucleotide modification
  • 5other context
  • 5other post-translational modification
Date released
  • 37November, 2017
  • 21November, 2018
  • 11October, 2018
  • August, 2017
  • 6January, 2019
  • 5May, 2019
  • 5May, 2021
  • 5May, 2024
  • 4April, 2019
  • 4December, 2017
  • 4June, 2019
  • 2December, 2018
  • 1August, 2021
  • 1November, 2019
Available data
  • 98bed narrowPeak
  • 98bigWig
  • 95bam
  • 91bigBed narrowPeak
  • 81fastq
  • 7bed broadPeak
  • 7bigBed broadPeak
  • 1tar
Organism
  • 106Homo sapiens
Biosample type
  • 65cell line
  • 26tissue
  • 8primary cell
  • 7in vitro differentiated cells
Organ
  • 58liver
  • 11heart
  • 10blood
  • 10bodily fluid
  • 8epithelium
  • 7pancreas
  • 6connective tissue
  • 5adipose tissue
  • 5vasculature
  • 4blood vessel
  • 3brain
  • 3kidney
  • 1artery
  • 1eye
Project
  • 106AMP
Genome assembly (visualization)
  • 93GRCh38
  • 92hg19
Lab
  • 95AMP-T2D consortium
  • 5Kyle Gaulton, UCSD
  • 5Patrick T. Ellinor, Broad
  • 1Bing Ren, UCSD
Audit category:
  • 4inconsistent ontology term
Audit category:
  • 2missing controlled_by
Audit category:
  • 6inconsistent control read length
  • 3inconsistent control run_type
month_released!
  • August, 2017
BIOSAMPLE
ASSAY

106 results

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Clear Filters
ChIP-seq
cell line
HepG254
GM1287810
EndoC_BH11
tissue
body of pancreas5
left cardiac atrium5
heart left ventricle3
omental fat pad3
subcutaneous adipose tissue2
primary cell
astrocyte of the cerebellum1
brain microvascular endothelial cell1
cardiac fibroblast1
cardiac muscle cell1
choroid plexus epithelial cell1
in vitro differentiated cells
embryonic stem cell5
hepatocyte2
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