Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 285ChIP-seq
  • 5MeRIP-seq
  • 3single cell RNA-seq
Assay category
  • 285DNA binding
  • 3Transcription
Target of assay
  • 818histone
  • 818histone modification
  • 467transcription factor
  • 426narrow histone mark
  • 392broad histone mark
  • 293control
  • 106RNA binding protein
  • 89recombinant protein
  • 33chromatin remodeller
  • 5nucleotide modification
  • 5other context
  • 5other post-translational modification
Date released
  • 71November, 2017
  • August, 2017
  • 39October, 2019
  • 29October, 2018
  • 23May, 2019
  • 23May, 2020
  • 21December, 2017
  • 14April, 2019
  • 12August, 2021
  • 9May, 2021
  • 8February, 2018
  • 8June, 2019
  • 6November, 2018
  • 6September, 2017
  • 5November, 2020
  • 4December, 2018
  • 4January, 2019
  • 3February, 2021
  • 3July, 2019
  • 3October, 2017
  • 2November, 2019
Available data
  • 275bam
  • 137fastq
  • 57tagAlign
  • 22bigWig
  • 7bed bed3+
  • 3tsv
Organism
  • 293Homo sapiens
Biosample type
  • 158tissue
  • 83cell line
  • 29in vitro differentiated cells
  • 22primary cell
  • 1stem cell
Organ
  • 97liver
  • 32pancreas
  • 31brain
  • 22vasculature
  • 21blood vessel
  • 21connective tissue
  • 20heart
  • 18adipose tissue
  • 18epithelium
  • 17limb
  • 12kidney
  • 11nerve
  • 9artery
  • 8spleen
  • 7embryo
  • 6blood
  • 6bodily fluid
  • 3musculature of body
  • 2vein
  • 1eye
Project
  • 293AMP
Genome assembly (visualization)
  • 29hg19
  • 10GRCh38
Lab
  • 276AMP-T2D consortium
  • 8Kyle Gaulton, UCSD
  • 5Rohit N. Kulkarni, M.D., Ph.D.
  • 4Bing Ren, UCSD
Audit category:
  • 15inconsistent ontology term
month_released!
  • August, 2017
BIOSAMPLE
ASSAY

293 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
MeRIP-seq
single cell RNA-seq
tissue
liver32
tibial nerve11
subcutaneous adipose tissue10
body of pancreas9
islet of Langerhans62
cell line
HepG260
GM128786
Panc16
EndoC_BH123
smooth muscle cell of the coronary artery2
in vitro differentiated cells
neural progenitor cell7
embryonic stem cell6
pancreatic endoderm5
Hepatic endoderm2
definitive endodermal cell2
primary cell
CD8-positive, alpha-beta T cell3
cardiac fibroblast2
cerebellar granule cell2
endothelial cell of umbilical vein2
epithelial cell of proximal tubule2
stem cell
hESC1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego