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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
257
gene expression
226
accessible chromatin
209
target gene predictions
169
candidate regulatory elements
92
differential activity
83
chromatin state
58
binding sites
41
histone modifications
41
variant allelic effects
3
eQTL
2
caQTL
Date released
254
February, 2021
235
September, 2022
155
September, 2023
130
November, 2021
127
February, 2024
41
May, 2021
38
March, 2023
35
June, 2020
31
August, 2021
22
January, 2021
16
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
10
May, 2024
9
February, 2020
7
April, 2020
7
March, 2020
7
October, 2022
August, 2018
5
October, 2019
4
August, 2017
3
May, 2022
2
March, 2024
1
July, 2020
1
November, 2019
Available data
746
bed bed3+
334
tsv
180
bigWig
78
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
1
bed bed9+
Organism
1181
Homo sapiens
Biosample type
858
primary cell
170
cell line
96
tissue
56
in vitro differentiated cells
1
stem cell
Organ
953
epithelium
652
kidney
467
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
270
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
865
AMP
155
KPMP
130
ENCODE
22
T1D
7
LungMap
2
community
Genome assembly (visualization)
828
hg19
326
GRCh38
month_released!
August, 2018
BIOSAMPLE
TYPE
1181 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
endothelial cell
9
15
7
3
2
1
2
1
2
hepatocyte
13
8
3
2
1
1
4
2
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 155 more…
cell line
H1-hESC
8
1
39
1
1
2
1
EndoC_BH1
8
8
1
3
1
H9
8
7
1
H7-hESC
1
2
1
1
1
HUES6
1
1
2
1
1
+ See 25 more…
tissue
pigmented layer of retina
20
chorionic villus
4
8
4
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
trophoblast
1
3
4
2
1
+ See 21 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
retinal pigment epithelial cell
6
trophoblast cell
2
2
1
ectodermal cell
1
2
1
+ See 12 more…
stem cell
H1-hESC
1
See all biosamples
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