Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
59
DNA binding
9
DNA accessibility
Target of assay
51
transcription factor
10
RNA binding protein
10
chromatin remodeller
6
control
1
histone
1
histone modification
narrow histone mark
Date released
27
December, 2018
17
January, 2019
15
November, 2018
8
January, 2021
1
January, 2018
Available data
59
bam
59
fastq
54
bigWig
53
bed narrowPeak
53
bigBed narrowPeak
Organism
68
Homo sapiens
Biosample type
60
cell line
8
primary cell
Organ
813
pancreas
700
liver
632
connective tissue
477
adipose tissue
419
epithelium
225
heart
209
kidney
169
vasculature
168
brain
164
blood vessel
151
bone element
107
limb
98
artery
83
musculature of body
68
blood
68
bodily fluid
35
nerve
27
eye
23
spleen
21
embryo
20
lung
18
ureter
16
vein
8
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
60
AMP
8
T1D
Genome assembly (visualization)
54
hg19
53
GRCh38
Lab
60
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
month_released!
August, 2021
February, 2023
organ_slims!
large intestine
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
68 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
59
1
primary cell
peripheral blood mononuclear cell
8
Download