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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
39
target gene predictions
36
chromatin state
10
accessible chromatin
6
binding sites
5
histone modifications
2
gene expression
Date released
98
September, 2022
46
February, 2021
7
June, 2020
6
November, 2021
May, 2021
3
August, 2017
3
February, 2024
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
132
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
167
Homo sapiens
Biosample type
129
tissue
32
cell line
6
primary cell
Organ
902
epithelium
623
kidney
437
brain
435
connective tissue
367
musculature of body
306
lung
280
intestine
262
vasculature
242
heart
239
limb
232
pancreas
211
bodily fluid
201
blood
200
embryo
197
blood vessel
196
skin of body
167
large intestine
144
liver
142
extraembryonic component
116
stomach
109
eye
89
bone element
85
mammary gland
82
small intestine
80
uterus
77
adipose tissue
75
prostate gland
71
placenta
70
adrenal gland
70
artery
64
ureter
63
penis
61
lymph node
48
thymus
46
gonad
42
esophagus
41
spinal cord
32
spleen
24
lymphatic vessel
24
lymphoid tissue
24
nerve
24
testis
22
vein
21
ovary
21
thyroid gland
18
mouth
18
skeleton
16
bronchus
13
bone marrow
11
breast
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
2
pituitary gland
1
pericardium
Project
161
AMP
6
ENCODE
Genome assembly (visualization)
165
hg19
41
GRCh38
month_released!
August, 2021
January, 2022
May, 2021
BIOSAMPLE
TYPE
167 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
tissue
large intestine
27
13
13
1
1
sigmoid colon
10
6
5
1
transverse colon
8
4
4
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 6 more…
cell line
HT-29
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
RKO
1
1
1
1
HCT-116 cell
1
2
+ See 3 more…
primary cell
colon epithelial cell
3
3
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