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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
51
candidate regulatory elements
30
target gene predictions
28
chromatin state
14
accessible chromatin
10
histone modifications
4
binding sites
4
variant allelic effects
3
Fine-mapped variants
3
gene expression
2
eQTL
1
caQTL
1
differential activity
Date released
79
September, 2022
38
February, 2021
August, 2021
6
March, 2020
5
January, 2020
5
June, 2020
4
May, 2020
3
August, 2017
2
February, 2020
2
May, 2021
2
May, 2022
1
February, 2024
1
January, 2022
1
November, 2019
1
November, 2021
October, 2022
1
September, 2018
Available data
115
bed bed3+
25
bed bed9
8
bigWig
8
tsv
1
bam
1
bigBed bed9
Organism
151
Homo sapiens
Biosample type
116
tissue
26
cell line
9
primary cell
Organ
epithelium
622
kidney
460
brain
437
connective tissue
371
musculature of body
307
lung
288
intestine
269
pancreas
261
vasculature
247
heart
244
limb
206
embryo
201
blood vessel
200
skin of body
196
bodily fluid
186
blood
173
large intestine
145
extraembryonic component
145
liver
119
stomach
107
eye
88
bone element
84
mammary gland
84
small intestine
83
adipose tissue
82
uterus
78
prostate gland
74
artery
73
adrenal gland
72
placenta
64
ureter
62
penis
60
lymph node
49
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
25
nerve
25
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
150
AMP
1
ENCODE
Genome assembly (visualization)
145
hg19
42
GRCh38
month_released!
August, 2021
October, 2022
organ_slims!
epithelium
BIOSAMPLE
TYPE
151 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
binding sites
variant allelic effects
Fine-mapped variants
gene expression
eQTL
caQTL
differential activity
tissue
liver
13
10
9
4
2
1
1
1
1
1
renal pelvis
19
9
9
2
1
left renal pelvis
6
2
2
1
1
right renal pelvis
6
2
2
1
1
right lobe of liver
2
1
1
3
1
1
cell line
HepG2
2
3
2
2
5
1
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
primary cell
hepatic stellate cell
1
1
1
3
1
1
1
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