Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
267
candidate regulatory elements
239
gene expression
174
target gene predictions
139
chromatin state
130
accessible chromatin
70
differential activity
38
binding sites
33
variant allelic effects
31
histone modifications
17
eQTL
6
Fine-mapped variants
2
caQTL
Date released
387
September, 2022
311
February, 2021
157
September, 2023
63
November, 2021
August, 2021
36
June, 2020
29
May, 2020
24
January, 2020
20
February, 2024
18
February, 2020
18
May, 2021
14
October, 2022
13
March, 2020
8
January, 2022
7
August, 2017
7
March, 2023
7
November, 2022
3
April, 2020
3
March, 2024
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
April, 2019
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2019
Available data
678
bed bed3+
304
tsv
132
bed bed9
82
bigWig
81
txt
4
bigBed bed9
1
bigBed narrowPeak
Organism
1146
Homo sapiens
Biosample type
582
primary cell
440
tissue
72
cell line
51
in vitro differentiated cells
1
stem cell
Organ
926
epithelium
624
kidney
466
brain
449
connective tissue
374
musculature of body
311
lung
289
intestine
269
pancreas
265
vasculature
247
heart
244
limb
215
bodily fluid
207
embryo
205
blood
204
skin of body
203
blood vessel
174
large intestine
146
extraembryonic component
146
liver
119
stomach
109
eye
89
bone element
87
mammary gland
84
small intestine
83
adipose tissue
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
921
AMP
155
KPMP
63
ENCODE
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
821
hg19
245
GRCh38
month_released!
August, 2021
BIOSAMPLE
TYPE
1146 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
fibroblast
4
16
1
6
2
epithelial cell of proximal tubule
2
15
1
1
1
1
1
pericyte cell
1
10
1
10
glomerular endothelial cell
2
13
1
1
2
1
osteoblast
2
2
2
1
5
3
2
+ See 103 more…
tissue
kidney
29
7
14
16
3
1
1
2
adrenal gland
28
1
17
14
1
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
+ See 27 more…
cell line
HEK293
3
1
1
1
2
1
GM23248
2
1
1
1
1
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
+ See 19 more…
in vitro differentiated cells
adipocyte
4
1
6
6
4
1
1
mesenchymal stem cell
3
3
2
1
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download