Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
172
candidate regulatory elements
130
target gene predictions
100
accessible chromatin
90
chromatin state
51
gene expression
38
binding sites
30
histone modifications
16
eQTL
16
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
Date released
236
September, 2022
165
February, 2021
56
November, 2021
28
June, 2020
22
May, 2021
21
February, 2024
17
September, 2023
13
October, 2022
August, 2021
11
March, 2020
10
August, 2017
10
January, 2020
10
May, 2020
10
May, 2024
9
February, 2020
9
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
March, 2024
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
November, 2019
Available data
499
bed bed3+
80
bed bed9
67
tsv
59
bigWig
6
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
665
Homo sapiens
Biosample type
296
primary cell
253
tissue
65
cell line
50
in vitro differentiated cells
1
stem cell
Organ
936
epithelium
624
kidney
466
brain
457
connective tissue
374
musculature of body
311
lung
289
intestine
269
pancreas
268
vasculature
249
heart
244
limb
215
bodily fluid
207
embryo
205
blood
204
skin of body
203
blood vessel
174
large intestine
148
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
87
mammary gland
84
small intestine
83
adipose tissue
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
587
AMP
56
ENCODE
15
KPMP
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
589
hg19
181
GRCh38
month_released!
August, 2021
BIOSAMPLE
TYPE
665 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
primary cell
fibroblast
3
4
16
1
2
6
pericyte cell
3
10
10
1
osteoblast
2
2
5
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
+ See 44 more…
tissue
large intestine
27
14
1
13
1
spleen
15
8
2
6
1
1
1
adipose tissue
7
8
2
6
3
1
2
1
sigmoid colon
10
7
1
5
transverse colon
8
5
1
4
1
+ See 19 more…
cell line
HT-29
2
2
1
1
1
1
GM23248
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
fibroblast of cardiac tissue
2
1
2
+ See 15 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download