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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
186
accessible chromatin
113
target gene predictions
94
candidate regulatory elements
79
gene expression
44
chromatin state
38
binding sites
38
differential activity
34
variant allelic effects
22
histone modifications
2
caQTL
1
eQTL
Date released
125
November, 2021
124
September, 2022
108
February, 2021
75
February, 2024
38
March, 2023
34
May, 2021
20
January, 2021
20
September, 2023
17
June, 2020
15
November, 2022
12
February, 2023
10
May, 2024
8
May, 2020
7
April, 2020
August, 2021
6
August, 2018
6
January, 2020
6
March, 2020
5
October, 2019
5
October, 2022
3
August, 2017
2
March, 2024
2
May, 2022
1
February, 2020
1
July, 2020
1
November, 2019
Available data
490
bed bed3+
158
bigWig
103
tsv
41
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
651
Homo sapiens
Biosample type
530
primary cell
54
tissue
41
cell line
26
in vitro differentiated cells
Organ
936
epithelium
kidney
466
brain
457
connective tissue
374
musculature of body
311
lung
289
intestine
269
pancreas
268
vasculature
249
heart
244
limb
215
bodily fluid
207
embryo
205
blood
204
skin of body
203
blood vessel
174
large intestine
148
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
87
mammary gland
84
small intestine
83
adipose tissue
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
trachea
4
nose
1
pericardium
Project
477
AMP
125
ENCODE
20
KPMP
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
533
hg19
222
GRCh38
month_released!
August, 2021
organ_slims!
kidney
trachea
BIOSAMPLE
TYPE
651 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
chromatin state
binding sites
differential activity
variant allelic effects
histone modifications
caQTL
eQTL
primary cell
endothelial cell
14
7
3
6
2
2
1
2
1
hepatocyte
8
3
2
13
1
1
2
1
endothelial cell of umbilical vein
2
4
6
5
2
1
foreskin keratinocyte
4
11
4
pancreatic ductal cell
6
3
3
1
3
1
2
+ See 85 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
pancreatic ductal cell
2
breast - mammary tissue
1
+ See 9 more…
cell line
EndoC_BH1
8
1
8
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 5 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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