Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
290
candidate regulatory elements
269
gene expression
249
accessible chromatin
236
target gene predictions
155
chromatin state
99
differential activity
54
binding sites
52
variant allelic effects
36
histone modifications
17
eQTL
11
Fine-mapped variants
4
caQTL
2
variant to gene
1
sQTL
Date released
428
September, 2022
322
February, 2021
155
September, 2023
140
November, 2021
95
February, 2024
51
March, 2023
49
May, 2021
35
June, 2020
August, 2021
26
May, 2020
24
March, 2020
23
January, 2020
22
January, 2021
17
February, 2020
15
November, 2022
12
February, 2023
9
August, 2017
9
October, 2022
7
April, 2020
7
August, 2018
7
October, 2019
5
January, 2022
5
May, 2022
4
March, 2024
2
May, 2019
2
November, 2019
1
April, 2019
1
January, 2018
1
July, 2020
1
June, 2021
Available data
930
bed bed3+
352
tsv
197
bigWig
145
bed bed9
66
txt
15
bigBed narrowPeak
7
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1475
Homo sapiens
Biosample type
863
primary cell
513
tissue
71
cell line
28
in vitro differentiated cells
Organ
926
epithelium
624
kidney
466
brain
449
connective tissue
374
musculature of body
311
lung
289
intestine
269
pancreas
265
vasculature
247
heart
244
limb
215
bodily fluid
207
embryo
205
blood
204
skin of body
203
blood vessel
174
large intestine
146
extraembryonic component
146
liver
119
stomach
109
eye
89
bone element
87
mammary gland
84
small intestine
83
adipose tissue
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1149
AMP
155
KPMP
140
ENCODE
22
T1D
7
LungMap
2
community
Genome assembly (visualization)
1097
hg19
370
GRCh38
month_released!
August, 2021
BIOSAMPLE
TYPE
1475 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
gene expression
accessible chromatin
target gene predictions
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
variant to gene
sQTL
primary cell
endothelial cell
6
14
7
2
2
1
1
2
hepatocyte
1
13
8
3
1
1
2
1
epithelial cell of proximal tubule
2
15
1
1
1
1
1
endothelial cell of umbilical vein
6
2
4
5
2
1
glomerular endothelial cell
2
13
2
1
1
1
+ See 153 more…
tissue
muscle of arm
33
1
16
16
1
muscle of leg
27
2
14
15
muscle of back
28
13
13
thymus
20
1
14
11
1
1
islet of Langerhans
11
6
1
3
2
1
1
6
2
2
1
+ See 44 more…
cell line
EndoC_BH1
8
8
1
3
1
LHCN-M2
2
1
1
1
1
1
A673
2
2
1
Panc1
2
2
1
SJCRH30
2
1
1
1
+ See 12 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
See all biosamples
Download