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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
97
ChIP-seq
Assay category
97
DNA binding
Target of assay
327
transcription factor
103
control
97
histone modification
96
histone
82
recombinant protein
57
RNA binding protein
56
narrow histone mark
40
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
33
August, 2017
27
May, 2020
17
December, 2017
15
November, 2017
August, 2021
5
October, 2019
Available data
77
bam
77
bigWig
75
bed narrowPeak
55
tagAlign
45
fastq
35
bigBed narrowPeak
14
bed broadPeak
14
bigBed broadPeak
Organism
97
Homo sapiens
Biosample type
70
tissue
15
cell line
12
in vitro differentiated cells
Organ
187
brain
151
pancreas
97
heart
97
liver
90
epithelium
78
connective tissue
71
vasculature
70
blood vessel
49
limb
33
musculature of body
32
adipose tissue
30
kidney
24
nerve
20
artery
15
vein
12
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
97
AMP
Genome assembly (visualization)
77
hg19
67
GRCh38
Lab
97
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
12
inconsistent control read length
month_released!
August, 2021
BIOSAMPLE
ASSAY
97 results
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Clear Filters
ChIP-seq
tissue
liver
65
right lobe of liver
5
cell line
HepG2
15
in vitro differentiated cells
hepatocyte
12
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