Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 50target gene predictions
  • 38accessible chromatin
  • 35candidate regulatory elements
  • 33differential activity
  • 24gene expression
  • 17chromatin state
  • 12binding sites
  • 11histone modifications
  • 4variant allelic effects
  • 3Fine-mapped variants
  • 2eQTL
  • 1caQTL
Date released
  • 46September, 2022
  • 43July, 2026
  • 30May, 2026
  • 28February, 2024
  • 26February, 2021
  • 12May, 2024
  • August, 2021
  • 10March, 2020
  • 5June, 2020
  • 5November, 2021
  • 4March, 2023
  • 3August, 2017
  • 3January, 2020
  • 3May, 2020
  • 3May, 2021
  • 2February, 2020
  • 2May, 2022
  • 1January, 2022
  • 1July, 2020
  • 1November, 2019
  • 1October, 2022
  • 1September, 2018
Available data
  • 153bed bed3+
  • 27tsv
  • 23bigWig
  • 14bed bed9
  • 3csv
  • 1bam
  • 1bigBed bed9
Organism
  • 230Homo sapiens
Collection Tags
  • 46DGA
  • 42EpiMap
  • 30pyxis
  • 28HDMA
  • 24AMP
  • 17ChIP-Atlas
  • 15ENCODE-rE2G
  • 14 T2DKP
  • 12FNIH_projects-liver
  • 11ENCODE
  • 9T2DKP
  • 5GTEx
  • 4HPAP
  • 1T1D
  • 1T2D
  • 1eQTLCatalogue
Biosample type
  • 132primary cell
  • 59tissue
  • 31cell line
  • 8in vitro differentiated cells
Organ
  • 3363blood
  • 2901vasculature
  • 2860blood vessel
  • 2850bodily fluid
  • 2659vein
  • 929epithelium
  • 903brain
  • 728kidney
  • 507connective tissue
  • 480heart
  • 440lung
  • 385musculature of body
  • 358intestine
  • 311pancreas
  • 296skin of body
  • 244limb
  • 230liver
  • 226large intestine
  • 207embryo
  • 174extraembryonic component
  • 161eye
  • 140stomach
  • 136adipose tissue
  • 111muscle organ
  • 106bone element
  • 104mammary gland
  • 102adrenal gland
  • 97placenta
  • 97small intestine
  • 93thymus
  • 93uterus
  • 88artery
  • 87prostate gland
  • 73ureter
  • 64gonad
  • 64penis
  • 63spleen
  • 62lymph node
  • 60__MARKER__
  • 49spinal cord
  • 48esophagus
  • 47thyroid gland
  • 32ovary
  • 31testis
  • 25nerve
  • 24lymphoid tissue
  • 24skeleton
  • 21lymphatic vessel
  • 21mouth
  • 16bronchus
  • 15breast
  • 13bone marrow
  • 13pituitary gland
  • 13urinary bladder
  • 12tongue
  • 12vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 225AMP
  • 5ENCODE
Genome assembly (visualization)
  • 128hg19
  • 112GRCh38
month_released!
  • August, 2021
BIOSAMPLE
TYPE

230 results

search-icontable-tab-icon
Clear Filters
target gene predictions
accessible chromatin
candidate regulatory elements
differential activity
gene expression
chromatin state
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
eQTL
caQTL
primary cell
hepatocyte81224131112
hepatic stellate cell34241111
endothelial cell of hepatic sinusoid646
endothelial cell1114
cholangiocyte114
tissue
liver12413191211
right lobe of liver621131
left lobe of liver1
cell line
HepG2522225
HuH-7211111
HuH-7.5211
hepatic stellate cell11
in vitro differentiated cells
hepatocyte221
hepatocyte(AFP)3
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego