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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
88
accessible chromatin
88
candidate regulatory elements
73
target gene predictions
48
chromatin state
33
gene expression
31
binding sites
25
histone modifications
19
eQTL
16
variant allelic effects
8
differential activity
2
caQTL
2
pQTL
Date released
120
September, 2022
109
February, 2021
50
November, 2021
20
June, 2020
18
February, 2024
September, 2023
16
May, 2021
12
October, 2022
11
August, 2021
10
January, 2020
10
May, 2020
10
May, 2024
February, 2020
March, 2020
7
August, 2017
7
March, 2023
7
November, 2022
6
January, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
333
bed bed3+
55
bigWig
41
bed bed9
40
tsv
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
433
Homo sapiens
Biosample type
271
primary cell
84
tissue
47
in vitro differentiated cells
31
cell line
Organ
789
epithelium
500
kidney
433
connective tissue
407
brain
360
musculature of body
310
lung
287
intestine
266
pancreas
231
heart
229
limb
218
bodily fluid
217
vasculature
214
embryo
207
blood
204
skin of body
173
large intestine
167
blood vessel
146
extraembryonic component
146
liver
118
stomach
107
eye
89
bone element
87
mammary gland
83
small intestine
83
uterus
78
prostate gland
76
adipose tissue
73
placenta
72
adrenal gland
64
penis
64
ureter
62
lymph node
60
artery
49
gonad
48
thymus
44
esophagus
39
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
thyroid gland
22
ovary
22
vein
19
lymphatic vessel
19
mouth
19
nerve
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
vagina
9
urinary bladder
5
trachea
4
nose
Project
372
AMP
50
ENCODE
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
382
hg19
122
GRCh38
2
hg18
month_released!
August, 2022
February, 2020
March, 2020
September, 2023
BIOSAMPLE
TYPE
433 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
caQTL
pQTL
primary cell
fibroblast
16
3
4
1
2
6
pericyte cell
10
3
10
1
osteoblast
5
2
2
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
1
6
2
1
4
2
+ See 37 more…
tissue
adipose tissue
2
7
7
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
4
5
1
1
omental fat pad
2
5
2
2
1
1
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
2
2
+ See 6 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
1
mesenchymal stem cell
1
3
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 5 more…
cell line
GM23248
1
2
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 7 more…
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