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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
20
accessible chromatin
20
gene expression
20
target gene predictions
16
chromatin state
14
candidate regulatory elements
8
binding sites
8
eQTL
7
histone modifications
4
differential activity
3
Fine-mapped variants
3
variant allelic effects
1
caQTL
Date released
43
September, 2022
29
February, 2024
February, 2021
10
August, 2021
10
March, 2020
4
June, 2020
4
March, 2023
4
November, 2021
3
August, 2017
3
May, 2021
2
February, 2020
2
January, 2020
2
May, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
May, 2024
1
November, 2019
1
October, 2022
1
September, 2018
Available data
75
bed bed3+
24
tsv
20
bigWig
13
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
124
Homo sapiens
Biosample type
50
primary cell
48
tissue
20
cell line
6
in vitro differentiated cells
Organ
763
epithelium
464
kidney
connective tissue
356
brain
283
musculature of body
246
pancreas
241
lung
220
vasculature
218
intestine
209
heart
186
limb
168
blood vessel
162
embryo
144
bodily fluid
137
blood
136
skin of body
132
liver
128
large intestine
113
extraembryonic component
92
eye
90
stomach
73
uterus
66
adipose tissue
66
small intestine
60
artery
59
adrenal gland
59
mammary gland
55
placenta
53
bone element
49
prostate gland
46
ureter
38
gonad
38
thymus
36
penis
35
esophagus
35
lymph node
34
spinal cord
24
spleen
22
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
18
testis
16
vein
15
mouth
12
pituitary gland
11
bronchus
10
breast
9
skeleton
9
urinary bladder
8
bone marrow
8
tongue
8
vagina
4
nose
1
pericardium
1
trachea
Project
120
AMP
4
ENCODE
Genome assembly (visualization)
97
hg19
57
GRCh38
2
hg18
month_released!
August, 2022
February, 2021
organ_slims!
connective tissue
BIOSAMPLE
TYPE
124 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
chromatin state
candidate regulatory elements
binding sites
eQTL
histone modifications
differential activity
Fine-mapped variants
variant allelic effects
caQTL
primary cell
hepatocyte
8
10
3
1
2
3
2
endothelial cell of hepatic sinusoid
6
4
6
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
tissue
liver
4
1
10
9
7
7
1
1
right lobe of liver
1
1
1
1
1
3
cell line
HepG2
1
3
2
1
2
4
HuH-7
1
1
1
1
HuH-7.5
1
1
1
in vitro differentiated cells
hepatocyte
1
1
1
hepatocyte(AFP)
3
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