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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
114
ChIP-seq
Assay category
114
DNA binding
Target of assay
265
histone
265
histone modification
150
narrow histone mark
114
broad histone mark
66
control
43
transcription factor
13
RNA binding protein
2
chromatin remodeller
Date released
42
November, 2017
40
August, 2017
15
May, 2019
10
October, 2017
4
June, 2019
3
October, 2019
Available data
77
bam
77
bed narrowPeak
76
bigWig
62
bigBed narrowPeak
57
tagAlign
18
fastq
4
bed broadPeak
Organism
114
Homo sapiens
Biosample type
90
tissue
20
in vitro differentiated cells
4
primary cell
Organ
78
pancreas
70
brain
57
heart
45
blood vessel
45
vasculature
44
connective tissue
37
epithelium
34
limb
32
liver
20
adipose tissue
20
musculature of body
16
nerve
15
kidney
14
artery
9
vein
4
spleen
3
embryo
Project
114
AMP
Genome assembly (visualization)
77
GRCh38
41
hg19
Lab
114
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
3
missing controlled_by
month_released!
December, 2017
September, 2020
BIOSAMPLE
ASSAY
114 results
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ChIP-seq
tissue
subcutaneous abdominal adipose tissue
20
brain
13
layer of hippocampus
12
caudate nucleus
8
substantia nigra
8
+ See 4 more…
in vitro differentiated cells
adipocyte
20
primary cell
mesenchymal stem cell
4
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