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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
94
ChIP-seq
Assay category
94
DNA binding
Target of assay
986
histone modification
985
histone
498
narrow histone mark
486
broad histone mark
472
transcription factor
322
control
110
RNA binding protein
89
recombinant protein
33
chromatin remodeller
5
nucleotide modification
5
other context
5
other post-translational modification
Date released
68
November, 2017
19
November, 2018
7
October, 2019
Available data
94
bam
93
bed narrowPeak
93
bigWig
87
fastq
86
bigBed narrowPeak
1
bed broadPeak
1
bigBed broadPeak
Organism
94
Homo sapiens
Biosample type
91
cell line
3
tissue
Organ
84
liver
7
kidney
3
spleen
Project
94
AMP
Genome assembly (visualization)
93
GRCh38
90
hg19
Lab
94
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
1
inconsistent control read length
month_released!
December, 2017
organ_slims!
skin of body
BIOSAMPLE
ASSAY
94 results
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ChIP-seq
cell line
HepG2
84
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
RCC 7860 vector
2
tissue
spleen
3
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