Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
45
ATAC-seq
29
ChIP-seq
22
DNase-seq
2
single cell RNA-seq
Assay category
67
DNA accessibility
58
Transcription
29
DNA binding
Target of assay
18
histone
18
histone modification
14
broad histone mark
7
control
4
narrow histone mark
4
transcription factor
Date released
66
February, 2021
35
February, 2023
26
October, 2019
20
June, 2019
May, 2019
3
July, 2019
2
August, 2021
2
February, 2020
Available data
115
bam
100
bigWig
89
bed narrowPeak
58
tsv
40
bigBed narrowPeak
22
bed bed3+
22
bed broadPeak
22
bigBed broadPeak
6
tagAlign
Organism
154
Homo sapiens
Biosample type
86
tissue
66
cell line
2
primary cell
Organ
944
pancreas
786
liver
684
connective tissue
513
epithelium
491
adipose tissue
372
heart
346
kidney
258
brain
186
vasculature
180
blood vessel
159
bone element
136
artery
115
limb
89
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
154
AMP
Genome assembly (visualization)
143
GRCh38
108
hg19
Lab
154
AMP-T2D consortium
month_released!
December, 2019
May, 2019
organ_slims!
embryo
BIOSAMPLE
ASSAY
154 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
DNase-seq
single cell RNA-seq
tissue
coronary artery
1
36
2
tibial artery
1
1
23
2
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
+ See 1 more…
cell line
smooth muscle cell of the coronary artery
52
8
6
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
See all biosamples
Download