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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
Assay category
20
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
9
November, 2018
7
December, 2018
7
January, 2019
March, 2020
1
October, 2017
Available data
24
bam
24
fastq
16
bigWig
14
bed narrowPeak
13
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
24
Homo sapiens
Biosample type
24
tissue
Organ
914
pancreas
781
liver
678
connective tissue
489
adipose tissue
483
epithelium
378
heart
322
kidney
198
brain
185
vasculature
179
blood vessel
159
bone element
115
artery
91
musculature of body
69
blood
69
bodily fluid
53
limb
40
eye
24
embryo
24
spleen
19
lung
18
ureter
16
skeleton
2
pericardium
1
bone marrow
1
nerve
1
spinal cord
1
thymus
Project
24
AMP
Genome assembly (visualization)
16
GRCh38
14
hg19
Lab
24
AMP-T2D consortium
month_released!
February, 2018
March, 2020
October, 2019
BIOSAMPLE
ASSAY
24 results
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ChIP-seq
WGBS
ATAC-seq
DNase-seq
tissue
spleen
20
2
1
1
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