Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
120
target gene predictions
111
accessible chromatin
97
chromatin state
81
candidate regulatory elements
72
gene expression
51
differential activity
31
variant allelic effects
20
Fine-mapped variants
17
eQTL
11
binding sites
3
caQTL
2
sQTL
2
variant to gene
1
histone modifications
Date released
251
September, 2022
February, 2021
51
March, 2023
42
February, 2024
39
May, 2021
35
September, 2023
28
May, 2020
27
March, 2020
25
January, 2020
24
November, 2021
20
January, 2021
15
June, 2020
February, 2020
9
August, 2021
8
January, 2022
8
October, 2019
7
August, 2018
6
November, 2019
5
February, 2023
4
August, 2017
4
October, 2022
3
April, 2020
3
May, 2019
2
March, 2024
1
April, 2019
1
January, 2018
1
June, 2021
Available data
361
bed bed3+
132
tsv
92
bed bed9
90
bigWig
13
bigBed bed9
11
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
619
Homo sapiens
Biosample type
320
tissue
259
primary cell
36
cell line
4
in vitro differentiated cells
Organ
744
epithelium
455
kidney
342
connective tissue
338
brain
277
musculature of body
244
pancreas
241
lung
218
intestine
212
vasculature
196
heart
180
limb
163
blood vessel
162
embryo
144
bodily fluid
137
blood
136
skin of body
128
large intestine
128
liver
113
extraembryonic component
90
eye
90
stomach
73
uterus
66
small intestine
61
adipose tissue
59
adrenal gland
59
mammary gland
56
artery
55
placenta
53
bone element
49
prostate gland
46
ureter
38
gonad
38
thymus
36
penis
35
esophagus
35
lymph node
33
spinal cord
24
spleen
19
lymphoid tissue
19
nerve
19
ovary
19
thyroid gland
18
testis
16
lymphatic vessel
16
vein
15
mouth
12
pituitary gland
11
bronchus
10
breast
9
skeleton
9
urinary bladder
8
bone marrow
8
tongue
8
vagina
4
nose
1
trachea
Project
535
AMP
35
KPMP
24
ENCODE
20
T1D
3
LungMap
2
community
Genome assembly (visualization)
477
hg19
203
GRCh38
month_released!
February, 2020
February, 2021
BIOSAMPLE
TYPE
619 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
accessible chromatin
chromatin state
candidate regulatory elements
gene expression
differential activity
variant allelic effects
Fine-mapped variants
eQTL
binding sites
caQTL
sQTL
variant to gene
histone modifications
tissue
muscle of arm
16
1
16
16
1
muscle of leg
14
2
15
13
islet of Langerhans
1
6
3
5
1
2
12
1
2
2
coronary artery
3
3
3
2
1
2
3
1
1
tibial nerve
3
3
4
3
2
3
1
+ See 28 more…
primary cell
pancreatic beta cell
2
8
3
3
1
endothelial cell of hepatic sinusoid
6
4
6
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
pancreatic ductal cell
3
6
3
3
1
+ See 42 more…
cell line
EndoC_BH1
1
8
8
3
1
GM23248
1
1
1
1
Panc1
2
1
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
See all biosamples
Download