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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
231
gene expression
193
accessible chromatin
167
candidate regulatory elements
160
target gene predictions
92
differential activity
88
chromatin state
37
binding sites
33
histone modifications
15
variant allelic effects
2
eQTL
1
caQTL
Date released
246
September, 2022
242
February, 2021
155
September, 2023
127
November, 2021
February, 2024
39
May, 2021
38
March, 2023
32
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
February, 2020
7
April, 2020
7
March, 2020
October, 2022
6
August, 2017
6
August, 2018
5
October, 2019
4
March, 2024
2
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
Available data
608
bed bed3+
311
tsv
143
bigWig
82
bed bed9
78
txt
4
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1019
Homo sapiens
Biosample type
745
primary cell
183
tissue
71
cell line
20
in vitro differentiated cells
Organ
858
epithelium
640
kidney
441
brain
421
connective tissue
351
musculature of body
306
lung
282
intestine
250
pancreas
240
vasculature
239
heart
238
limb
199
skin of body
182
blood vessel
171
bodily fluid
170
large intestine
163
embryo
160
blood
145
extraembryonic component
124
liver
117
stomach
104
eye
88
bone element
84
small intestine
83
mammary gland
82
adipose tissue
77
prostate gland
72
adrenal gland
72
placenta
70
artery
64
ureter
62
penis
60
lymph node
49
gonad
49
thymus
43
esophagus
41
spinal cord
34
spleen
31
uterus
25
testis
23
lymphoid tissue
23
ovary
22
nerve
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
Project
708
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
689
hg19
236
GRCh38
month_released!
February, 2020
February, 2024
October, 2022
BIOSAMPLE
TYPE
1019 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
chromatin state
binding sites
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
endothelial cell
8
14
7
2
1
1
hepatocyte
8
3
1
3
1
1
4
1
epithelial cell of proximal tubule
15
1
2
1
1
1
glomerular endothelial cell
13
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
1
1
+ See 143 more…
tissue
large intestine
1
26
14
13
1
sigmoid colon
1
10
7
5
pigmented layer of retina
19
transverse colon
1
8
5
4
1
breast epithelium
1
5
3
2
+ See 18 more…
cell line
EndoC_BH1
8
8
1
3
1
HT-29
1
2
2
1
1
1
SW480
1
2
1
1
1
1
HCT116
2
1
1
RKO
1
1
1
1
+ See 13 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
+ See 2 more…
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