Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
21
candidate regulatory elements
17
target gene predictions
15
chromatin state
10
accessible chromatin
10
histone modifications
7
eQTL
6
binding sites
3
Fine-mapped variants
2
gene expression
1
caQTL
1
variant allelic effects
Date released
40
September, 2022
20
February, 2021
7
August, 2021
6
March, 2020
4
June, 2020
3
August, 2017
February, 2020
2
January, 2020
2
May, 2021
2
May, 2022
February, 2024
1
January, 2022
1
May, 2020
1
May, 2024
1
November, 2019
1
November, 2021
1
October, 2022
1
September, 2018
Available data
67
bed bed3+
12
bed bed9
5
bigWig
5
tsv
1
bam
1
bigBed bed9
Organism
93
Homo sapiens
Biosample type
55
tissue
28
cell line
10
primary cell
Organ
epithelium
642
kidney
447
brain
441
connective tissue
354
musculature of body
310
lung
283
intestine
250
pancreas
247
vasculature
241
heart
238
limb
203
skin of body
190
bodily fluid
184
blood vessel
179
blood
171
large intestine
164
embryo
146
extraembryonic component
127
liver
117
stomach
106
eye
89
bone element
86
mammary gland
84
small intestine
82
adipose tissue
77
prostate gland
73
placenta
72
adrenal gland
71
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
43
esophagus
42
spinal cord
34
spleen
32
uterus
26
testis
24
lymphatic vessel
23
lymphoid tissue
23
ovary
23
vein
22
nerve
22
thyroid gland
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
Project
92
AMP
1
ENCODE
Genome assembly (visualization)
87
hg19
26
GRCh38
2
hg18
month_released!
February, 2020
February, 2024
organ_slims!
epithelium
BIOSAMPLE
TYPE
93 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
eQTL
binding sites
Fine-mapped variants
gene expression
caQTL
variant allelic effects
tissue
liver
13
10
9
4
2
7
1
1
right lobe of liver
2
1
1
3
1
cell line
HepG2
2
3
2
2
5
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
primary cell
hepatic stellate cell
2
1
1
3
1
1
1
Download