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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
248
candidate regulatory elements
236
gene expression
139
target gene predictions
129
chromatin state
105
accessible chromatin
70
differential activity
41
binding sites
32
histone modifications
32
variant allelic effects
24
eQTL
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
357
September, 2022
305
February, 2021
157
September, 2023
November, 2021
38
August, 2021
37
June, 2020
29
May, 2020
24
January, 2020
19
February, 2024
February, 2020
16
May, 2021
15
October, 2022
12
March, 2020
9
January, 2022
7
August, 2017
7
March, 2023
7
November, 2022
3
April, 2020
3
March, 2024
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
April, 2019
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2019
Available data
605
bed bed3+
311
tsv
122
bed bed9
93
txt
56
bigWig
4
bigBed bed9
1
bigBed narrowPeak
Organism
1066
Homo sapiens
Biosample type
527
primary cell
408
tissue
79
cell line
51
in vitro differentiated cells
1
stem cell
Organ
813
epithelium
640
kidney
448
brain
401
connective tissue
358
musculature of body
302
lung
270
intestine
257
pancreas
255
vasculature
238
limb
234
heart
218
bodily fluid
213
embryo
207
blood
196
blood vessel
194
skin of body
168
large intestine
149
liver
143
extraembryonic component
110
stomach
103
eye
88
bone element
84
adipose tissue
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
artery
71
placenta
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
42
spinal cord
41
esophagus
34
spleen
26
testis
24
lymphoid tissue
23
vein
22
nerve
21
ovary
21
thyroid gland
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
Project
900
AMP
155
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
741
hg19
178
GRCh38
2
hg18
month_released!
February, 2020
November, 2021
BIOSAMPLE
TYPE
1066 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
differential activity
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
pQTL
primary cell
epithelial cell of proximal tubule
2
15
1
1
1
1
1
glomerular endothelial cell
2
13
1
1
2
1
osteoblast
2
2
2
1
5
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
+ See 104 more…
tissue
kidney
29
7
14
16
10
1
2
1
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
left kidney
18
9
9
+ See 25 more…
cell line
HEK293
3
1
1
1
2
1
GM23248
2
1
1
1
1
1
NT2-D1 cell
1
1
1
1
2
ACHN
2
1
1
1
Caki2
2
1
1
1
+ See 21 more…
in vitro differentiated cells
adipocyte
4
1
6
6
4
1
1
mesenchymal stem cell
3
3
2
1
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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