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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
964
histone modifications
865
candidate regulatory elements
843
accessible chromatin
810
binding sites
598
gene expression
492
target gene predictions
134
differential activity
131
eQTL
128
variant allelic effects
107
chromatin state
69
Fine-mapped variants
13
caQTL
5
hQTL
3
meQTL
3
other
3
pQTL
3
sQTL
2
variant to gene
1
representative DNase hypersensitivity sites
Date released
2554
February, 2021
September, 2022
356
May, 2021
352
February, 2024
313
November, 2021
286
September, 2023
284
June, 2020
149
May, 2020
120
August, 2021
119
March, 2020
102
January, 2022
101
October, 2022
85
January, 2020
February, 2020
49
May, 2022
44
November, 2022
41
May, 2024
36
January, 2021
32
August, 2017
31
February, 2023
30
March, 2024
23
March, 2023
18
April, 2020
12
November, 2019
9
May, 2019
8
October, 2019
7
April, 2019
3
November, 2020
3
September, 2018
2
August, 2018
1
August, 2020
1
August, 2022
1
January, 2018
1
July, 2020
Available data
4146
bed bed3+
779
tsv
485
bigWig
108
txt
38
bigBed bed9
36
bed bed9
34
bed bed9+
21
csv
2
bigBed narrowPeak
1
bam
Organism
5127
Homo sapiens
Biosample type
1875
primary cell
1785
cell line
1146
tissue
362
in vitro differentiated cells
4
stem cell
Organ
799
epithelium
418
kidney
339
connective tissue
268
brain
pancreas
189
vasculature
165
musculature of body
143
bodily fluid
139
blood vessel
138
blood
138
heart
134
embryo
125
intestine
110
liver
102
skin of body
101
lung
100
limb
80
eye
76
large intestine
71
uterus
60
adipose tissue
50
artery
50
stomach
47
bone element
47
extraembryonic component
45
mammary gland
39
prostate gland
38
lymph node
34
penis
31
adrenal gland
27
small intestine
26
gonad
25
placenta
25
ureter
24
esophagus
18
lymphatic vessel
18
spinal cord
17
vein
16
spleen
16
thymus
14
testis
13
nerve
13
pituitary gland
11
ovary
11
thyroid gland
10
bone marrow
bronchus
9
lymphoid tissue
9
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
Project
4508
AMP
313
ENCODE
281
KPMP
40
T1D
18
LungMap
9
community
5
ITG
Genome assembly (visualization)
4316
hg19
998
GRCh38
4
hg18
month_released!
February, 2020
September, 2022
organ_slims!
bronchus
pancreas
BIOSAMPLE
TYPE
5174 results
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Clear Filters
histone modifications
candidate regulatory elements
accessible chromatin
binding sites
gene expression
target gene predictions
differential activity
eQTL
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
hQTL
meQTL
other
pQTL
sQTL
variant to gene
representative DNase hypersensitivity sites
primary cell
monocyte
86
18
1
15
2
4
2
1
1
CD8-positive, alpha-beta T cell
30
7
4
3
5
1
endothelial cell
1
3
15
2
9
7
1
2
2
fibroblast
3
16
1
4
2
6
hepatocyte
4
1
8
1
13
2
2
+ See 418 more…
cell line
HeLa-S3
2
1
52
H1-hESC
1
1
2
8
38
K562
1
1
1
2
17
1
breast cancer cell
11
9
HFFc6
19
+ See 743 more…
tissue
kidney
2
15
10
1
7
1
1
2
heart
1
18
5
1
2
1
2
2
retina
1
3
23
1
1
stomach
1
21
3
1
2
1
liver
2
6
4
1
3
1
7
2
1
+ See 242 more…
in vitro differentiated cells
neural progenitor cell
15
1
10
7
1
adipocyte
1
2
4
1
1
4
4
embryonic stem cell
1
6
1
1
5
hematopoietic multipotent progenitor cell
1
9
1
1
1
cardiomyocytes
11
+ See 118 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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