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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
210
accessible chromatin
152
gene expression
118
target gene predictions
94
candidate regulatory elements
48
chromatin state
40
binding sites
40
variant allelic effects
30
differential activity
27
histone modifications
2
caQTL
2
eQTL
Date released
189
February, 2021
September, 2023
145
September, 2022
127
November, 2021
76
February, 2024
38
March, 2023
33
May, 2021
24
June, 2020
23
August, 2021
20
January, 2021
15
November, 2022
13
May, 2020
12
February, 2023
12
January, 2020
February, 2020
7
April, 2020
6
August, 2018
5
March, 2020
5
October, 2019
5
October, 2022
2
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
530
bed bed3+
175
bigWig
169
tsv
78
txt
46
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
763
Homo sapiens
Biosample type
636
primary cell
60
tissue
41
cell line
26
in vitro differentiated cells
Organ
785
epithelium
503
kidney
445
brain
434
connective tissue
369
musculature of body
311
lung
289
intestine
275
pancreas
244
heart
238
limb
226
vasculature
218
bodily fluid
215
embryo
207
blood
204
skin of body
179
blood vessel
174
large intestine
154
liver
146
extraembryonic component
119
stomach
107
eye
89
bone element
87
mammary gland
84
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
66
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
vein
22
nerve
19
mouth
skeleton
16
bronchus
16
lymphatic vessel
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
Project
607
AMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
578
hg19
229
GRCh38
month_released!
February, 2020
September, 2023
organ_slims!
skeleton
vein
BIOSAMPLE
TYPE
763 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
chromatin state
binding sites
variant allelic effects
differential activity
histone modifications
caQTL
eQTL
primary cell
endothelial cell
15
9
7
2
2
1
2
1
hepatocyte
8
13
3
1
1
1
2
4
epithelial cell of proximal tubule
1
15
1
2
1
1
1
glomerular endothelial cell
2
13
1
2
1
1
foreskin keratinocyte
4
11
4
+ See 114 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 14 more…
cell line
EndoC_BH1
8
8
1
1
3
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 5 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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