Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
76
candidate regulatory elements
75
target gene predictions
50
binding sites
42
chromatin state
27
histone modifications
16
accessible chromatin
4
eQTL
2
gene expression
1
pQTL
Date released
120
September, 2022
93
February, 2021
28
February, 2024
20
October, 2022
15
June, 2020
5
May, 2021
3
August, 2021
2
August, 2017
2
January, 2022
2
March, 2024
1
March, 2020
1
May, 2020
1
November, 2021
Available data
247
bed bed3+
40
bed bed9
2
tsv
1
bigWig
Organism
293
Homo sapiens
Biosample type
212
cell line
70
tissue
11
primary cell
Organ
967
epithelium
643
kidney
472
connective tissue
448
brain
369
musculature of body
311
lung
289
intestine
275
pancreas
269
vasculature
249
heart
238
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
199
blood vessel
174
large intestine
160
liver
146
extraembryonic component
119
stomach
107
eye
bone element
87
mammary gland
84
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
71
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
29
lymphatic vessel
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
22
nerve
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
Project
292
AMP
1
ENCODE
Genome assembly (visualization)
289
hg19
71
GRCh38
month_released!
February, 2020
organ_slims!
bone element
BIOSAMPLE
TYPE
293 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
binding sites
chromatin state
histone modifications
accessible chromatin
eQTL
gene expression
pQTL
cell line
K562
7
23
2
7
1
1
GM12878
2
8
2
2
1
1
GM06990
2
1
2
1
1
1
GM19240
1
2
2
1
1
1
HAP-1
2
2
1
1
1
1
+ See 28 more…
tissue
thymus
20
14
1
11
1
1
testis
7
3
1
3
1
1
1
1
blood
2
cerebrospinal fluid
1
whole blood
1
primary cell
peripheral blood mononuclear cell
4
1
1
peripheral blood stem cell
1
1
1
Leydig cell
1
fetal thymocyte
1
See all biosamples
Download