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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
349
candidate regulatory elements
215
target gene predictions
195
chromatin state
94
accessible chromatin
66
histone modifications
42
Fine-mapped variants
37
binding sites
26
gene expression
24
eQTL
24
variant allelic effects
2
caQTL
1
differential activity
Date released
521
September, 2022
283
February, 2021
48
March, 2020
39
June, 2020
34
January, 2020
25
May, 2020
February, 2020
22
May, 2021
21
January, 2022
19
February, 2024
18
November, 2021
11
August, 2017
11
October, 2022
6
May, 2019
5
March, 2024
4
May, 2022
3
September, 2023
2
January, 2021
1
August, 2021
1
November, 2019
1
October, 2019
Available data
793
bed bed3+
183
bed bed9
64
tsv
50
bigWig
9
bigBed bed9
1
bed bed9+
Organism
1075
Homo sapiens
Biosample type
783
tissue
181
cell line
104
primary cell
6
in vitro differentiated cells
1
stem cell
Organ
950
epithelium
643
kidney
459
connective tissue
448
brain
369
musculature of body
311
lung
289
intestine
275
pancreas
264
vasculature
246
heart
238
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
199
blood vessel
174
large intestine
156
liver
146
extraembryonic component
119
stomach
107
eye
89
bone element
87
mammary gland
84
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
71
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
26
testis
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
22
nerve
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
Project
1055
AMP
18
ENCODE
2
T1D
Genome assembly (visualization)
1026
hg19
299
GRCh38
month_released!
February, 2020
BIOSAMPLE
TYPE
1075 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
Fine-mapped variants
binding sites
gene expression
eQTL
variant allelic effects
caQTL
differential activity
tissue
brain
29
16
18
2
3
1
2
1
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
large intestine
27
14
13
1
1
muscle of back
28
13
13
+ See 100 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
HT-29
2
2
1
1
1
1
SK-N-MC
2
1
1
1
1
2
+ See 31 more…
primary cell
skeletal muscle satellite cell
2
2
2
5
1
skeletal muscle fiber
5
2
2
choroid plexus epithelial cell
2
1
1
1
1
1
type I muscle cell
1
3
1
1
1
type II muscle cell
1
3
1
1
1
+ See 20 more…
in vitro differentiated cells
hippocampal neuron
1
1
myotube
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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