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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
114
candidate regulatory elements
102
target gene predictions
90
accessible chromatin
67
chromatin state
51
gene expression
33
differential activity
25
binding sites
17
histone modifications
15
eQTL
12
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
185
September, 2022
113
February, 2021
47
March, 2023
36
May, 2021
29
November, 2021
26
February, 2024
22
January, 2021
14
June, 2020
10
March, 2020
8
August, 2021
7
August, 2018
7
May, 2020
6
October, 2019
5
August, 2017
5
January, 2022
4
January, 2020
4
October, 2022
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2022
Available data
366
bed bed3+
78
tsv
72
bigWig
60
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
1
bed bed9+
Organism
535
Homo sapiens
Biosample type
216
tissue
190
primary cell
123
cell line
6
in vitro differentiated cells
Organ
940
epithelium
643
kidney
451
connective tissue
448
brain
369
musculature of body
311
lung
289
intestine
275
pancreas
261
vasculature
244
heart
238
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
199
blood vessel
174
large intestine
154
liver
146
extraembryonic component
119
stomach
107
eye
89
bone element
87
mammary gland
84
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
71
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
22
nerve
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
Project
482
AMP
29
ENCODE
22
T1D
2
community
Genome assembly (visualization)
440
hg19
127
GRCh38
month_released!
February, 2020
BIOSAMPLE
TYPE
535 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
differential activity
binding sites
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
tissue
small intestine
29
17
1
15
1
islet of Langerhans
1
6
3
11
2
1
13
1
2
2
2
body of pancreas
8
5
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
7
4
4
+ See 22 more…
primary cell
pancreatic ductal cell
3
6
3
3
1
2
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 25 more…
cell line
MCF-7
9
6
1
5
3
2
EndoC_BH1
1
8
8
3
1
MG63
2
1
1
1
1
1
T47D
3
2
2
OCI-LY1
2
1
1
1
1
+ See 15 more…
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
pancreatic ductal cell
3
See all biosamples
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