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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
220
candidate regulatory elements
167
target gene predictions
122
chromatin state
113
accessible chromatin
45
gene expression
40
binding sites
37
histone modifications
23
eQTL
19
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
329
September, 2022
199
February, 2021
71
November, 2021
32
June, 2020
24
February, 2024
23
May, 2021
17
September, 2023
13
October, 2022
11
August, 2017
11
August, 2021
11
March, 2020
10
January, 2020
10
January, 2022
10
May, 2020
February, 2020
7
March, 2023
7
November, 2022
3
April, 2020
3
March, 2024
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
612
bed bed3+
111
bed bed9
68
bigWig
64
tsv
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
810
Homo sapiens
Biosample type
383
tissue
308
primary cell
68
cell line
50
in vitro differentiated cells
1
stem cell
Organ
940
epithelium
643
kidney
451
connective tissue
448
brain
369
musculature of body
311
lung
289
intestine
275
pancreas
261
vasculature
244
heart
238
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
199
blood vessel
174
large intestine
154
liver
146
extraembryonic component
119
stomach
107
eye
89
bone element
87
mammary gland
84
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
71
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
22
nerve
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
Project
713
AMP
71
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
737
hg19
217
GRCh38
2
hg18
month_released!
February, 2020
BIOSAMPLE
TYPE
810 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
tissue
small intestine
29
17
15
1
1
placenta
26
15
14
1
1
2
1
large intestine
27
14
13
1
1
adipose tissue
7
8
6
2
3
1
4
1
sigmoid colon
10
7
5
1
+ See 27 more…
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
1
10
osteoblast
2
2
1
5
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
+ See 50 more…
cell line
HT-29
2
2
1
1
1
1
GM23248
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
fibroblast of cardiac tissue
2
1
2
+ See 16 more…
in vitro differentiated cells
adipocyte
4
6
6
4
1
1
1
mesenchymal stem cell
3
3
2
1
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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