Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 78accessible chromatin
  • 42target gene predictions
  • 18candidate regulatory elements
  • 9chromatin state
  • 6binding sites
  • 4histone modifications
  • 2variant allelic effects
Date released
  • 52July, 2026
  • 27September, 2022
  • 24February, 2023
  • 22November, 2022
  • 17February, 2021
  • 6June, 2020
  • 4November, 2021
  • February, 2020
  • 2January, 2020
  • 2May, 2020
  • 2October, 2022
  • 1February, 2024
Available data
  • 139bed bed3+
  • 36bigWig
  • 9bed bed9
Organism
  • 159Homo sapiens
Collection Tags
  • 47CMDGA
  • 41HDMA
  • 27EpiMap
  • 14ChIP-Atlas
  • 11ENCODE
  • 11ENCODE-rE2G
  • 4AMP
  • 4T2DKP
  • 2DGA
Biosample type
  • 73tissue
  • 68primary cell
  • 12cell line
  • 6in vitro differentiated cells
Organ
  • 3365blood
  • 2897vasculature
  • 2856blood vessel
  • 2853bodily fluid
  • 2659vein
  • 943epithelium
  • 885brain
  • 747kidney
  • 509connective tissue
  • 477heart
  • 440lung
  • 380musculature of body
  • 358intestine
  • 317pancreas
  • 296skin of body
  • 238limb
  • 238liver
  • 226large intestine
  • 215embryo
  • 174extraembryonic component
  • 159eye
  • 140stomach
  • 137adipose tissue
  • 111muscle organ
  • 104bone element
  • 104mammary gland
  • 102adrenal gland
  • 97placenta
  • 97small intestine
  • 93thymus
  • 93uterus
  • 87prostate gland
  • 84artery
  • 73ureter
  • 64gonad
  • 64penis
  • 63spleen
  • 62lymph node
  • 60__MARKER__
  • 48esophagus
  • 48spinal cord
  • 47thyroid gland
  • 32ovary
  • 31testis
  • 24lymphoid tissue
  • 22nerve
  • 22skeleton
  • 21lymphatic vessel
  • 21mouth
  • 16bronchus
  • 15breast
  • 13bone marrow
  • 13pituitary gland
  • 13urinary bladder
  • 12tongue
  • 12vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
Project
  • 155AMP
  • 4ENCODE
Genome assembly (visualization)
  • 107hg19
  • 67GRCh38
month_released!
  • February, 2020
BIOSAMPLE
TYPE

159 results

search-icontable-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
binding sites
histone modifications
variant allelic effects
tissue
retina23663111
pigmented layer of retina20
eye1442
corneal epithelium1
primary cell
retinal pigment epithelial cell432121
iris pigment epithelial cell1221
fibroblast of the conjunctiva221
amacrine cell12
retinal bipolar neuron21
cell line
WERI-Rb-1132121
fibroblast of the conjunctiva1
retinal cell1
in vitro differentiated cells
retinal pigment epithelial cell6
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego