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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ATAC-seq
9
single cell RNA-seq
9
snATAC-seq
4
total RNA-seq
1
pCHi-C
Assay category
22
DNA accessibility
13
Transcription
Date released
18
April, 2020
8
February, 2021
8
February, 2023
1
March, 2020
1
October, 2019
Available data
8
bam
8
bed narrowPeak
4
bed bed3
4
txt
1
tsv
Organism
36
Homo sapiens
Biosample type
36
tissue
Organ
937
pancreas
790
liver
681
connective tissue
523
epithelium
488
adipose tissue
390
heart
354
kidney
274
brain
233
vasculature
227
blood vessel
159
bone element
139
artery
119
limb
94
musculature of body
69
blood
69
bodily fluid
60
eye
42
nerve
37
embryo
25
spleen
22
vein
19
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
18
AMP
18
LungMap
Genome assembly (visualization)
12
hg19
8
GRCh38
Lab
18
AMP-T2D consortium
18
Xin Sun, UCSD
month_released!
February, 2020
BIOSAMPLE
ASSAY
36 results
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ATAC-seq
single cell RNA-seq
snATAC-seq
total RNA-seq
pCHi-C
tissue
lung
9
9
1
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
pubis
1
1
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