Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
36
target gene predictions
33
candidate regulatory elements
33
chromatin state
9
accessible chromatin
1
binding sites
1
eQTL
Date released
99
September, 2022
February, 2021
6
June, 2020
3
May, 2021
3
November, 2021
1
January, 2022
1
October, 2022
Available data
79
bed bed3+
33
bed bed9
3
bigWig
Organism
113
Homo sapiens
Biosample type
74
tissue
32
primary cell
4
in vitro differentiated cells
3
cell line
Organ
749
epithelium
450
kidney
349
connective tissue
327
brain
musculature of body
242
pancreas
241
lung
218
intestine
204
vasculature
197
heart
179
limb
162
embryo
157
blood vessel
144
bodily fluid
137
blood
136
skin of body
129
liver
128
large intestine
113
extraembryonic component
90
eye
90
stomach
uterus
66
small intestine
62
adipose tissue
59
adrenal gland
59
mammary gland
56
artery
55
placenta
53
bone element
49
prostate gland
43
ureter
38
gonad
38
thymus
36
penis
35
esophagus
35
lymph node
33
spinal cord
24
spleen
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
18
testis
15
mouth
14
vein
12
pituitary gland
11
bronchus
10
breast
9
skeleton
9
urinary bladder
8
bone marrow
8
tongue
8
vagina
4
nose
1
pericardium
1
trachea
Project
110
AMP
3
ENCODE
Genome assembly (visualization)
112
hg19
37
GRCh38
month_released!
February, 2021
January, 2020
organ_slims!
musculature of body
uterus
BIOSAMPLE
TYPE
113 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
eQTL
tissue
placenta
15
14
14
1
1
chorionic villus
4
4
4
chorion membrane
3
3
3
1
umbilical cord
1
1
1
1
amnion
1
1
1
primary cell
trophoblast cell
5
4
4
1
fibroblast of villous mesenchyme
1
1
1
1
1
amnion mesenchymal stem cell
1
1
1
amniotic stem cell
1
1
1
epithelial cell of amnion
1
1
1
+ See 4 more…
in vitro differentiated cells
trophoblast cell
2
1
1
cell line
HTR-8/Svneo
1
1
1
See all biosamples
Download