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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
52
target gene predictions
42
chromatin state
39
candidate regulatory elements
12
accessible chromatin
3
eQTL
3
gene expression
1
binding sites
Date released
116
September, 2022
February, 2021
8
June, 2020
6
May, 2021
6
November, 2021
3
August, 2017
3
February, 2024
3
January, 2022
3
March, 2024
2
March, 2020
1
November, 2019
1
October, 2022
Available data
107
bed bed3+
39
bed bed9
4
bigWig
3
tsv
Organism
152
Homo sapiens
Biosample type
125
tissue
21
cell line
6
primary cell
Organ
743
epithelium
464
kidney
357
connective tissue
356
brain
283
musculature of body
241
lung
226
pancreas
220
vasculature
218
intestine
209
heart
186
limb
168
blood vessel
162
embryo
144
bodily fluid
137
blood
136
skin of body
132
liver
128
large intestine
113
extraembryonic component
92
eye
90
stomach
73
uterus
66
adipose tissue
66
small intestine
60
artery
59
adrenal gland
59
mammary gland
55
placenta
51
bone element
49
prostate gland
46
ureter
38
gonad
38
thymus
36
penis
35
esophagus
35
lymph node
34
spinal cord
24
spleen
22
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
18
testis
16
vein
15
mouth
12
pituitary gland
11
bronchus
10
breast
9
skeleton
9
urinary bladder
8
tongue
8
vagina
6
bone marrow
4
nose
1
pericardium
1
trachea
Project
146
AMP
6
ENCODE
Genome assembly (visualization)
146
hg19
51
GRCh38
month_released!
February, 2021
January, 2021
BIOSAMPLE
TYPE
152 results
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target gene predictions
chromatin state
candidate regulatory elements
accessible chromatin
eQTL
gene expression
binding sites
tissue
large intestine
14
13
13
1
spleen
8
6
6
2
1
1
sigmoid colon
7
5
5
1
transverse colon
5
4
4
1
1
colonic mucosa
2
3
2
+ See 6 more…
cell line
HCT116
3
1
1
HT-29
2
1
1
1
SW480
1
1
1
1
HCT-116 cell
1
1
1
colon epithelial cell
1
1
1
+ See 1 more…
primary cell
colon epithelial cell
3
3
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